File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/80c842d994decf3dc380a1d876a4a0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bc2728o1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:05:36,816 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:05:37,661 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:05:37,833 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:05:38,790 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:05:38,957 - cnv_pipe.batch.run_model - INFO - Processing cluster 102 with 182 probes
2026-06-04 17:05:39,333 - cnv_pipe.batch.run_model.cluster102 - INFO - Child process started for cluster 102 with 182 probes
2026-06-04 17:06:31,887 - cnv_pipe.batch.run_model.cluster102 - INFO - Child process finished cluster 102. Wrote cluster_102_samples.csv and cluster_102_params.csv
2026-06-04 17:06:31,888 - cnv_pipe.batch.run_model - INFO - Cluster 102 finished in 52.93 seconds. Status: SUCCESS