File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/8660c76052649752ef951bc88e7e0f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y4esb6se because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:28,216 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:29,040 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:29,210 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:30,150 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:30,328 - cnv_pipe.batch.run_model - INFO - Processing cluster 731 with 198 probes
2026-06-04 17:07:30,717 - cnv_pipe.batch.run_model.cluster731 - INFO - Child process started for cluster 731 with 198 probes
2026-06-04 17:08:29,555 - cnv_pipe.batch.run_model.cluster731 - INFO - Child process finished cluster 731. Wrote cluster_731_samples.csv and cluster_731_params.csv
2026-06-04 17:08:29,556 - cnv_pipe.batch.run_model - INFO - Cluster 731 finished in 59.23 seconds. Status: SUCCESS