mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1v3rh506 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:05:40,537 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:05:41,377 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:05:41,543 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:05:42,434 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:05:42,499 - cnv_pipe.batch.run_model - INFO - Processing cluster 125 with 162 probes
2026-06-04 17:05:42,954 - cnv_pipe.batch.run_model.cluster125 - INFO - Child process started for cluster 125 with 162 probes
2026-06-04 17:06:32,399 - cnv_pipe.batch.run_model.cluster125 - INFO - Child process finished cluster 125. Wrote cluster_125_samples.csv and cluster_125_params.csv
2026-06-04 17:06:32,401 - cnv_pipe.batch.run_model - INFO - Cluster 125 finished in 49.90 seconds. Status: SUCCESS