File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/68a43b6e6c5d7eaee35b841b56afd3/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/da54c6375df8ccea0887187c88916c/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/f630bcb2d83311569a3361afcdbfee/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/68a43b6e6c5d7eaee35b841b56afd3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/4d96e8781f0c8d7d3b2e438ddd21a3/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/99267ef50616064c15145c3cb93a1f/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/47d31a3a0619563c78711b3bcbb679/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/28441e4e59fd9bfae3e97e2d332e9a/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/64bee3e9ecae512a511790ecca3da2/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/68a43b6e6c5d7eaee35b841b56afd3/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/6259ff3943aa2acbcdfa16308d559c/Sig_18_Blood.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory