cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:173000001, elapsed 0.1s, est remaining 1.7s, peak mem 111MB, user 0.2s, sys 2.0s, output queue size 13
progress 10% @chr2:49000001, elapsed 0.2s, est remaining 1.6s, peak mem 111MB, user 0.3s, sys 4.6s, output queue size 24
progress 15% @chr3:4000001, elapsed 0.3s, est remaining 1.5s, peak mem 111MB, user 0.5s, sys 7.1s, output queue size 23
progress 20% @chr3:150000001, elapsed 0.3s, est remaining 1.4s, peak mem 111MB, user 0.6s, sys 9.5s, output queue size 18
progress 25% @chr4:121000001, elapsed 0.4s, est remaining 1.3s, peak mem 111MB, user 0.8s, sys 11.9s, output queue size 17
progress 30% @chr5:82000001, elapsed 0.5s, est remaining 1.2s, peak mem 111MB, user 1.0s, sys 14.3s, output queue size 16
progress 35% @chr6:55000001, elapsed 0.6s, est remaining 1.1s, peak mem 111MB, user 1.1s, sys 16.8s, output queue size 10
progress 40% @chr7:53000001, elapsed 0.7s, est remaining 1.0s, peak mem 111MB, user 1.2s, sys 19.3s, output queue size 11
progress 45% @chr8:54000001, elapsed 0.8s, est remaining 0.9s, peak mem 111MB, user 1.3s, sys 21.8s, output queue size 5
progress 50% @chr9:67000001, elapsed 0.9s, est remaining 0.9s, peak mem 111MB, user 1.4s, sys 24.3s, output queue size 6
progress 55% @chr10:91000001, elapsed 0.9s, est remaining 0.8s, peak mem 111MB, user 1.5s, sys 26.7s, output queue size 26
progress 60% @chr11:129000001, elapsed 1.0s, est remaining 0.7s, peak mem 111MB, user 1.6s, sys 29.2s, output queue size 21
progress 65% @chr12:122000001, elapsed 1.1s, est remaining 0.6s, peak mem 111MB, user 1.6s, sys 31.6s, output queue size 27
progress 70% @chr14:55000001, elapsed 1.2s, est remaining 0.5s, peak mem 111MB, user 1.7s, sys 34.1s, output queue size 10
progress 75% @chr16:22000001, elapsed 1.3s, est remaining 0.4s, peak mem 111MB, user 1.8s, sys 36.3s, output queue size 2
progress 80% @chr18:7000001, elapsed 1.3s, est remaining 0.3s, peak mem 111MB, user 1.9s, sys 38.5s, output queue size 3
progress 85% @chr20:14000001, elapsed 1.4s, est remaining 0.2s, peak mem 111MB, user 2.0s, sys 40.7s, output queue size 11
progress 90% @chrX:36000001, elapsed 1.5s, est remaining 0.2s, peak mem 120MB, user 2.6s, sys 42.2s, output queue size 114
progress 95% @chrY:34000001, elapsed 1.6s, est remaining 0.1s, peak mem 126MB, user 3.1s, sys 44.0s, output queue size 276
progress 100% @chr21:41000001, elapsed 2.0s, est remaining 0.0s, peak mem 156MB, user 4.4s, sys 46.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813904
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.557 user 23.837 sys 26.142 real
done: 1 calls 0.003 user 0.000 sys 0.011 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.007 user 0.003 sys 2.018 real
idle: 81 calls 0.004 user 0.012 sys 40.641 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 163659776 mem 4.857 user 47.753 sys 3.477 real