File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/23dc9194800c90e3bd58fdbbe27947/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o2x91yz3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:09:08,580 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:09:09,420 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:09:09,587 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:09:10,492 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:09:10,566 - cnv_pipe.batch.run_model - INFO - Processing cluster 1214 with 198 probes
2026-06-04 17:09:11,017 - cnv_pipe.batch.run_model.cluster1214 - INFO - Child process started for cluster 1214 with 198 probes
2026-06-04 17:10:10,273 - cnv_pipe.batch.run_model.cluster1214 - INFO - Child process finished cluster 1214. Wrote cluster_1214_samples.csv and cluster_1214_params.csv
2026-06-04 17:10:10,275 - cnv_pipe.batch.run_model - INFO - Cluster 1214 finished in 59.71 seconds. Status: SUCCESS