File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/67e78e646a130d86674787b0b8c934/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (HCC1395_BL)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/faf78686a962628edb10543df3e279/HCC1395_BL.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/7bd50c07b09e8f21e665d7f135ec17/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/67e78e646a130d86674787b0b8c934/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/94f675d00e56ef05b9b27cc967d0a4/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/66ea189f4c454216b5aa9bd8400713/HCC1395_BL.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/24e7fc26429a61d3f67ce86bfa3f54/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/481948b2ea3b1ee0e27facaccedf8c/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/bdf7e4f5405207f244e7721806949c/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/b30b8cb750426351779c3b51edcac1/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/67e78e646a130d86674787b0b8c934/.command.run
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory