File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/cdb164dc10604b372b07c967b21f9d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_3ry0nyc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:43,873 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:44,881 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:45,074 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:46,107 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:46,277 - cnv_pipe.batch.run_model - INFO - Processing cluster 925 with 183 probes
2026-06-04 17:13:46,726 - cnv_pipe.batch.run_model.cluster925 - INFO - Child process started for cluster 925 with 183 probes
2026-06-04 17:14:48,073 - cnv_pipe.batch.run_model.cluster925 - INFO - Child process finished cluster 925. Wrote cluster_925_samples.csv and cluster_925_params.csv
2026-06-04 17:14:48,074 - cnv_pipe.batch.run_model - INFO - Cluster 925 finished in 61.80 seconds. Status: SUCCESS