File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/5cce749784a4d4a78ef8b942d6127c/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_tissue)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/5cce749784a4d4a78ef8b942d6127c/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/f5d12ab421b699bfa173ff438dc01c/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/581c82ca874139dda2107cfb60e266/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/594bece4bc65a7064d69a51b778199/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/d524d82d6c10ef925e0d609a72f2b8/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fa/c836151604bf952cb212ddd9058f75/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/5cce749784a4d4a78ef8b942d6127c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/08ca51958ce4aac67b19e62b952fe2/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/4a19137c8a745f4f906a0f40d18dc1/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/16df2725710a1e7113f0eddc80ac94/Sig_18_tissue.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory