File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/10bd54a0772860e211bfed586f70b6/.command.err
Size
1.2 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4k6lejfm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:11:01,756 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:11:02,730 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:11:02,907 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:11:04,026 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:11:04,211 - cnv_pipe.batch.run_model - INFO - Processing cluster 81 with 187 probes
2026-06-04 17:11:04,628 - cnv_pipe.batch.run_model.cluster81 - INFO - Child process started for cluster 81 with 187 probes
2026-06-04 17:12:05,998 - cnv_pipe.batch.run_model.cluster81 - INFO - Child process finished cluster 81. Wrote cluster_81_samples.csv and cluster_81_params.csv
2026-06-04 17:12:06,000 - cnv_pipe.batch.run_model - INFO - Cluster 81 finished in 61.79 seconds. Status: SUCCESS