File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/9da996c08ab73c0bf68ba17720d496/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXQ0rF74/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXQ0rF74/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXQ0rF74/chr6_138229684-138229952.bed.gz.tbi
[2026-06-04T17:08:56.754890Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:08:56.759606Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:08:56.759622Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:08:56.759627Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:08:56.759632Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXQ0rF74'
[2026-06-04T17:08:56.759635Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:08:56.759640Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:08:56.759644Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:08:56.759648Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] memMb: 761556
[2026-06-04T17:08:56.759651Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:08:56.759656Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:08:56.759660Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:08:56.759664Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:08:56.759667Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:08:56.760548Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:08:56.760656Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:08:56.766347Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:08:56.767062Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:08:56.767461Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:08:56.767919Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:08:56.768237Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.768762Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.768852Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.768923Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.769038Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.769103Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.769220Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.769299Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.769752Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.770013Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.770115Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.770414Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.770488Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.770609Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.771043Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.772673Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.773150Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.773558Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.773798Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:08:56.774060Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774276Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774346Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774461Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774529Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774641Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774704Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774817Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774880Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.774990Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.775103Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.775423Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.775767Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.775902Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.775970Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776136Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776207Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776322Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776385Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776496Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776563Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776677Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.776770Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.777118Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.777553Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.777670Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.777735Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.777851Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.777916Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778091Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778160Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778265Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778333Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778442Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778505Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778692Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.778879Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779364Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779429Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779537Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779603Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779725Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779787Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779912Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.779982Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.780092Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.780162Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.780275Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.780482Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.781055Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.781584Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.781700Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.781773Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.781883Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.781946Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.783239Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.783810Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.783968Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784045Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784158Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784223Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784335Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784396Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784510Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784572Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784683Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.784749Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.785069Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.785729Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.785853Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.785931Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786049Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786115Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786224Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786291Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786406Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786467Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786581Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786641Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.786889Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.787595Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.787762Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.787878Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788003Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788076Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788196Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788265Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788371Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788437Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788548Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.788643Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.791130Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.791919Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.792589Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.793325Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.808044Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.808538Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.808641Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.808800Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.809863Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.810092Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.810177Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.810294Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.810667Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.810892Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.811528Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.811800Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.812252Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:08:56.812869Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:08:56.813276Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.814198Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.816772Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.817395Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:08:56.817850Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.820423Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:08:56.821133Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.827067Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:08:56.830140Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:08:56.833508Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:08:56.837190Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:08:56.837996Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:08:56.842823Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:08:56.904554Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.905660Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.908901Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:08:56.913679Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.913717Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.914586Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.914917Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.921132Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:08:56.921328Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:08:57.382795Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.384002Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.387691Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:08:57.448580Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.449688Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.454321Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:08:57.614169Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.614251Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.614286Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.615471Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.615911Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.618021Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.619579Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:08:57.623196Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:08:57.623888Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:08:57.683968Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.685085Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.688565Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:08:57.749532Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.749611Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.750616Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.750975Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.754380Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:08:57.755548Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:08:57.815951Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.816021Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.817010Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.817369Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.820598Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:08:57.822287Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:08:57.881978Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.882046Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.882892Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.883261Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.886651Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:08:57.887757Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:08:57.915889Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.916842Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:57.919968Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:08:58.081215Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.082312Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.085834Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:08:58.090144Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.090984Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.094425Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:08:58.155012Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.155992Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.158716Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:08:58.187977Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.188896Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.191395Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:08:58.804196Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.805310Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.808664Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:08:58.869474Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.870400Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.873438Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:08:58.934637Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.935605Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.939234Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:08:58.999890Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:58.999977Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.000857Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.001365Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.004669Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:08:59.005812Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:08:59.066017Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.066924Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.070180Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:08:59.131433Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.131520Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.132405Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.132716Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.136698Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:08:59.137570Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:08:59.197367Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.198292Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.201805Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:08:59.262595Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.262685Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.263535Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.263966Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.267479Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:08:59.268450Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:08:59.328233Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.329143Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.332233Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:08:59.393486Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.393559Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.394444Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.394783Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.398219Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:08:59.399234Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:08:59.459344Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.459432Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.460353Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.460750Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.464723Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:08:59.465959Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:08:59.526438Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.526522Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.527417Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.527766Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.530974Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:08:59.560222Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:08:59.561100Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.561176Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.561947Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.562477Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.566050Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:08:59.566861Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:08:59.627206Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.628145Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.631100Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:08:59.692359Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.693322Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:59.697079Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:09:00.108837Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.109813Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.113353Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:09:00.118292Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.119077Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.122205Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:09:00.151641Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.152590Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.157733Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:09:00.219786Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.220994Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.224191Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:09:00.435839Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.437210Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.440741Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:09:00.501953Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.503242Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.507070Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:09:00.568145Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.569392Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.572446Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:09:00.633712Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.634942Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.638494Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:09:00.849896Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.851187Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.854305Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:09:00.915635Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.917017Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.920554Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:00.981471Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.982404Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:00.985867Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:09:01.014751Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.016051Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.016390Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.019199Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.020705Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:09:01.021840Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:09:01.051485Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.052349Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.055123Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:09:01.084423Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.085271Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.088216Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:09:01.350238Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.350334Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.351172Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.352066Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.355102Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:09:01.356522Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:09:01.416332Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.416417Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.417210Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.417545Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.420880Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:09:01.422313Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:09:01.433886Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.434679Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.437364Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:09:01.450861Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.451618Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.454248Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:09:01.483660Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.483751Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.484546Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.484923Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.488400Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:09:01.489488Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:09:01.493086Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.493946Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.496812Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:09:01.558084Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.558897Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.562519Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:09:01.623548Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.624406Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.627565Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:09:01.739149Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.740008Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.743683Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:09:01.955469Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.956272Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.959511Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:09:02.020945Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.021750Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.024944Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:09:02.086187Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.086959Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.090482Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:09:02.151523Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.152341Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.155320Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:09:02.216594Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.217300Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.219935Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.220724Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.221084Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:09:02.223668Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:09:02.284973Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.285073Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.285836Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.286564Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.290167Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:09:02.333041Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:09:02.352617Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.352710Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.353389Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.353935Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.357557Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:02.358685Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:09:02.418706Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.419425Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.421807Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.422552Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.423097Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:09:02.425587Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:09:02.486811Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.487500Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.490950Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:09:02.853239Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.853332Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.853926Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.854313Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.857666Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:09:02.858804Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:09:02.918792Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.918876Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.919508Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.919989Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.923458Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:09:02.924562Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:09:02.952451Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.952524Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.953108Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.953493Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.956814Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:09:02.957489Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.957957Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:09:02.958506Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.961169Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:09:02.990778Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.990861Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.990893Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.991457Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.991820Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.992148Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:02.996074Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:09:02.997948Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:09:02.998797Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:09:03.001457Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.001509Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.002035Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.002665Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.005917Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:09:03.007399Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:09:03.035006Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.035079Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.035112Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.035670Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.036022Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.038367Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.039166Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:09:03.040071Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.043065Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:03.045683Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.046555Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.047044Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:09:03.049124Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.050977Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:09:03.052187Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:09:03.113495Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.113579Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.113612Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.113631Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.114208Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.114738Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.118335Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:09:03.119474Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:09:03.147539Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.148235Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.151573Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:03.152840Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.184880Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.184966Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.399702Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.400395Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:03.403442Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:09:03.465374Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.081663Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.082319Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.085484Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:09:04.147237Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.813516Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.814201Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.817325Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:09:04.878622Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.878988Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.879165Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.879661Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.880181Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.887072Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:09:04.889274Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:09:04.912960Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:09:04.944809Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.944886Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.944910Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.945184Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.945660Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.949543Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:09:04.950616Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:09:04.978627Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.982032Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.982237Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:09:04.985220Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:09:05.046677Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.417099Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:09:15.648523Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:09:15.648523Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] 
[2026-06-04T17:09:15.648523Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:09:15.648651Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] 
[2026-06-04T17:09:15.648662Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:09:15.648670Z] [nf-399da996c08ab73c0bf68ba17720d496-e081f-fr4wq] [611_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec