File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/526c2f761462f11c07a52559ded3f8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yv9drhk5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:17,469 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:18,315 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:18,490 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:19,495 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:19,667 - cnv_pipe.batch.run_model - INFO - Processing cluster 1070 with 187 probes
2026-06-04 17:14:20,053 - cnv_pipe.batch.run_model.cluster1070 - INFO - Child process started for cluster 1070 with 187 probes
2026-06-04 17:15:17,799 - cnv_pipe.batch.run_model.cluster1070 - INFO - Child process finished cluster 1070. Wrote cluster_1070_samples.csv and cluster_1070_params.csv
2026-06-04 17:15:17,801 - cnv_pipe.batch.run_model - INFO - Cluster 1070 finished in 58.13 seconds. Status: SUCCESS