mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mxkppyt3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:51,794 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:52,643 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:52,818 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:53,854 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:54,023 - cnv_pipe.batch.run_model - INFO - Processing cluster 961 with 199 probes
2026-06-04 17:13:54,412 - cnv_pipe.batch.run_model.cluster961 - INFO - Child process started for cluster 961 with 199 probes
2026-06-04 17:14:54,494 - cnv_pipe.batch.run_model.cluster961 - INFO - Child process finished cluster 961. Wrote cluster_961_samples.csv and cluster_961_params.csv
2026-06-04 17:14:54,495 - cnv_pipe.batch.run_model - INFO - Cluster 961 finished in 60.47 seconds. Status: SUCCESS