File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/7f1c033c13e01700f9e77138562d1e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dzfmk2xl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:24,156 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:25,087 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:25,266 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:26,341 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:26,521 - cnv_pipe.batch.run_model - INFO - Processing cluster 826 with 182 probes
2026-06-04 17:13:26,902 - cnv_pipe.batch.run_model.cluster826 - INFO - Child process started for cluster 826 with 182 probes
2026-06-04 17:14:22,652 - cnv_pipe.batch.run_model.cluster826 - INFO - Child process finished cluster 826. Wrote cluster_826_samples.csv and cluster_826_params.csv
2026-06-04 17:14:22,654 - cnv_pipe.batch.run_model - INFO - Cluster 826 finished in 56.13 seconds. Status: SUCCESS