File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/4526ec78551eef207250e1144b2ab2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hz65o4tt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:10,319 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:11,100 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:11,267 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:12,187 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:12,338 - cnv_pipe.batch.run_model - INFO - Processing cluster 1037 with 195 probes
2026-06-04 17:14:12,708 - cnv_pipe.batch.run_model.cluster1037 - INFO - Child process started for cluster 1037 with 195 probes
2026-06-04 17:15:08,407 - cnv_pipe.batch.run_model.cluster1037 - INFO - Child process finished cluster 1037. Wrote cluster_1037_samples.csv and cluster_1037_params.csv
2026-06-04 17:15:08,409 - cnv_pipe.batch.run_model - INFO - Cluster 1037 finished in 56.07 seconds. Status: SUCCESS