File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/5bc63b361518aa1cc2490dc5c1da29/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ayntktm_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:41,264 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:42,065 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:42,224 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:43,130 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:43,287 - cnv_pipe.batch.run_model - INFO - Processing cluster 1201 with 196 probes
2026-06-04 17:14:43,668 - cnv_pipe.batch.run_model.cluster1201 - INFO - Child process started for cluster 1201 with 196 probes
2026-06-04 17:15:39,401 - cnv_pipe.batch.run_model.cluster1201 - INFO - Child process finished cluster 1201. Wrote cluster_1201_samples.csv and cluster_1201_params.csv
2026-06-04 17:15:39,402 - cnv_pipe.batch.run_model - INFO - Cluster 1201 finished in 56.11 seconds. Status: SUCCESS