File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/030fc3548da77f3cc6e14731dbe1e1/.command.log
Size
3.8 KB
Task
DAQ:FLOWCELL_QC (REGRESSION)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/205b634eeb7c81949d65c6d89b31b9/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/137de0a9adf4bb65bdc2ac313e1b88/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/9824df9b14a60ea30cc32b51ac957d/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/9824df9b14a60ea30cc32b51ac957d/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/f610cb19dff37d4366293eedb4f87f/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/030fc3548da77f3cc6e14731dbe1e1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/205b634eeb7c81949d65c6d89b31b9/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/9824df9b14a60ea30cc32b51ac957d/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/5bddac064a06d32dd95e753dd0386c/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/770c515abcefa546e403b4e77b86c3/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/137de0a9adf4bb65bdc2ac313e1b88/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-platform-sandbox/pipeline-inputs/test_daq/e2e_regression_bcl/rundir/InterOp/TileMetricsOut.bin
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/5bddac064a06d32dd95e753dd0386c/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/d1a03b247d103d79141bb33e649b79/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/d1a03b247d103d79141bb33e649b79/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/137de0a9adf4bb65bdc2ac313e1b88/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/d1a03b247d103d79141bb33e649b79/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/f610cb19dff37d4366293eedb4f87f/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/205b634eeb7c81949d65c6d89b31b9/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/8a976b672cfcc780ba0dca8f88f0b1/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/8a976b672cfcc780ba0dca8f88f0b1/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/770c515abcefa546e403b4e77b86c3/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/770c515abcefa546e403b4e77b86c3/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/5bddac064a06d32dd95e753dd0386c/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/8a976b672cfcc780ba0dca8f88f0b1/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/030fc3548da77f3cc6e14731dbe1e1/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-inputs/test_daq/e2e_regression_bcl/rundir/RunInfo.xml
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/f610cb19dff37d4366293eedb4f87f/output/Reports/Index_Hopping_Counts.csv
==> STAGING COMPLETE (28 inputs)

INFO: InterOp files not provided, InterOp metrics will be null
Wrote flowcell_qc.csv with 7/13 metrics populated