File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/c6c3b56dab85d36fefbbe655435e6f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jljz87rx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:40,757 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:41,554 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:41,715 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:42,604 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:42,753 - cnv_pipe.batch.run_model - INFO - Processing cluster 913 with 200 probes
2026-06-04 17:13:43,121 - cnv_pipe.batch.run_model.cluster913 - INFO - Child process started for cluster 913 with 200 probes
2026-06-04 17:14:40,258 - cnv_pipe.batch.run_model.cluster913 - INFO - Child process finished cluster 913. Wrote cluster_913_samples.csv and cluster_913_params.csv
2026-06-04 17:14:40,259 - cnv_pipe.batch.run_model - INFO - Cluster 913 finished in 57.51 seconds. Status: SUCCESS