File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/4ac8ee11104c64190fa8a2b51a0896/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-esn5iapd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:05,508 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:06,338 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:06,520 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:07,504 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:07,692 - cnv_pipe.batch.run_model - INFO - Processing cluster 737 with 175 probes
2026-06-04 17:13:08,075 - cnv_pipe.batch.run_model.cluster737 - INFO - Child process started for cluster 737 with 175 probes
2026-06-04 17:14:00,235 - cnv_pipe.batch.run_model.cluster737 - INFO - Child process finished cluster 737. Wrote cluster_737_samples.csv and cluster_737_params.csv
2026-06-04 17:14:00,236 - cnv_pipe.batch.run_model - INFO - Cluster 737 finished in 52.54 seconds. Status: SUCCESS