File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/765b91081b4106aa1ce3ef7f268817/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7kszx2_8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:12:51,812 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:12:52,625 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:12:52,786 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:12:53,794 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:12:53,864 - cnv_pipe.batch.run_model - INFO - Processing cluster 661 with 195 probes
2026-06-04 17:12:54,241 - cnv_pipe.batch.run_model.cluster661 - INFO - Child process started for cluster 661 with 195 probes
2026-06-04 17:13:51,861 - cnv_pipe.batch.run_model.cluster661 - INFO - Child process finished cluster 661. Wrote cluster_661_samples.csv and cluster_661_params.csv
2026-06-04 17:13:51,862 - cnv_pipe.batch.run_model - INFO - Cluster 661 finished in 58.00 seconds. Status: SUCCESS