File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/bcd0929600c4c56a3edaeb6a2c0409/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j7vgpa7h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:44,077 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:44,929 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:45,099 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:46,039 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:46,206 - cnv_pipe.batch.run_model - INFO - Processing cluster 931 with 123 probes
2026-06-04 17:13:46,588 - cnv_pipe.batch.run_model.cluster931 - INFO - Child process started for cluster 931 with 123 probes
2026-06-04 17:14:24,736 - cnv_pipe.batch.run_model.cluster931 - INFO - Child process finished cluster 931. Wrote cluster_931_samples.csv and cluster_931_params.csv
2026-06-04 17:14:24,737 - cnv_pipe.batch.run_model - INFO - Cluster 931 finished in 38.53 seconds. Status: SUCCESS