cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_coding_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_coding_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:159000001, elapsed 0.0s, est remaining 0.5s, peak mem 100MB, user 0.0s, sys 0.4s, output queue size 6
progress 10% @chr2:74000001, elapsed 0.0s, est remaining 0.4s, peak mem 100MB, user 0.1s, sys 0.9s, output queue size 26
progress 15% @chr2:233000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.2s, sys 1.4s, output queue size 16
progress 20% @chr3:151000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.3s, sys 1.9s, output queue size 10
progress 25% @chr4:114000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.5s, sys 2.4s, output queue size 26
progress 30% @chr5:87000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.7s, sys 2.9s, output queue size 26
progress 35% @chr6:63000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.9s, sys 3.4s, output queue size 7
progress 40% @chr7:52000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 1.0s, sys 3.9s, output queue size 3
progress 45% @chr8:61000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 1.2s, sys 4.3s, output queue size 28
progress 50% @chr9:74000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 1.2s, sys 4.9s, output queue size 17
progress 55% @chr10:98000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 1.4s, sys 5.5s, output queue size 3
progress 60% @chr11:121000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 1.5s, sys 6.1s, output queue size 5
progress 65% @chr13:14000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 1.6s, sys 6.6s, output queue size 4
progress 70% @chr14:61000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 1.8s, sys 7.1s, output queue size 9
progress 75% @chr16:19000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 1.9s, sys 7.6s, output queue size 3
progress 80% @chr18:1000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 2.2s, sys 7.9s, output queue size 2
progress 85% @chr20:21000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 2.3s, sys 8.4s, output queue size 2
progress 90% @chrX:32000001, elapsed 0.4s, est remaining 0.0s, peak mem 130MB, user 2.8s, sys 8.9s, output queue size 114
progress 95% @chrY:31000001, elapsed 0.5s, est remaining 0.0s, peak mem 148MB, user 3.2s, sys 9.3s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.7s, est remaining 0.0s, peak mem 164MB, user 4.3s, sys 10.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395352
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.260 user 5.264 sys 6.416 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.000 sys 0.737 real
idle: 76 calls 0.009 user 0.017 sys 38.225 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 172986368 mem 4.587 user 10.651 sys 1.893 real