File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/c22ebf5fe5dd79b7f3f10e1a07acf8/.command.log
Size
89.4 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr12_102480219-102480663.bed)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/ff6eaa758c6f025b001c9e7a9f6eb5/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/c22ebf5fe5dd79b7f3f10e1a07acf8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/ff6eaa758c6f025b001c9e7a9f6eb5/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/c22ebf5fe5dd79b7f3f10e1a07acf8/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-04T17:08:50.669411Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:08:50.672884Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:08:50.672913Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:08:50.672919Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:08:50.672923Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXshgIPh'
[2026-06-04T17:08:50.672927Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:08:50.672931Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:08:50.672935Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:08:50.672938Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-04T17:08:50.672942Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:08:50.672945Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:08:50.672949Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:08:50.672952Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:08:50.672956Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:08:50.673556Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:08:50.673624Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:08:50.679599Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:08:50.680245Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:08:50.680531Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:08:50.680842Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:08:50.681120Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.682037Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.682127Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.682215Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.682479Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.682754Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.682860Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.683275Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.683518Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.684008Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.684123Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.686053Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.686215Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.686501Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.686561Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:08:50.686934Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.687297Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.687562Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.687680Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.687747Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.687941Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688008Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688116Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688181Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688292Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688353Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688475Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688541Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.688725Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.689142Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.689423Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.689740Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.689876Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.689939Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690050Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690130Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690239Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690305Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690453Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690518Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690631Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690691Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.690982Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691305Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691412Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691575Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691695Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691810Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691922Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.691991Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.692099Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.692163Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.692272Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.692441Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.692937Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693003Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693113Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693178Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693286Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693347Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693457Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693517Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693629Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693691Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693799Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.693864Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.694193Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.694647Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.694759Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.694821Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.694929Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.694989Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.695095Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.695163Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.696464Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.696824Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697435Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697506Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697613Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697681Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697791Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697853Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.697966Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.698029Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.698137Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.698202Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.698315Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.698400Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.698898Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699396Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699512Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699577Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699685Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699748Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699860Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.699921Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.700031Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.700091Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.715809Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.716133Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.716307Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.717232Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.717408Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.717822Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.718287Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.718781Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.719157Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.720273Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.720755Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.721308Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.722642Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.723255Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.724029Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.726874Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:08:50.727876Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.729300Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.731079Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:08:50.733703Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T17:08:50.738496Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T17:08:50.742104Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T17:08:50.748395Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T17:08:50.751962Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T17:08:50.752218Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T17:08:50.755204Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:08:50.755511Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T17:08:50.820938Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.821779Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.826121Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T17:08:50.826548Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.827542Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.831214Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:08:50.835236Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.836095Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.839689Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T17:08:50.950549Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.951538Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:50.956118Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T17:08:51.067155Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:51.068245Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:51.072035Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T17:08:51.634956Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:51.636045Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:51.639162Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T17:08:51.700616Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:51.701551Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:51.704701Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T17:08:52.066795Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.067785Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.071135Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T17:08:52.100372Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.101286Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.104097Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T17:08:52.133468Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.134370Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.137628Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T17:08:52.249218Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.250321Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.254097Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:08:52.415028Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.416164Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.418940Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T17:08:52.480309Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.481379Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.484319Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T17:08:52.545640Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.546667Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.550209Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T17:08:52.611171Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.612192Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.616451Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T17:08:52.827944Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.828981Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.832623Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T17:08:52.893720Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.894702Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.898951Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T17:08:52.959999Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.960986Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:08:52.964400Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T17:08:53.126085Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.126205Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.127151Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.127566Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.130603Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T17:08:53.131987Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T17:08:53.193496Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.193608Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.194438Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.195640Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.199639Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T17:08:53.200974Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T17:08:53.513130Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.513243Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.514113Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.514510Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.517544Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:08:53.518922Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T17:08:53.579875Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.579974Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.580796Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.582668Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.583505Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T17:08:53.587188Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T17:08:53.648255Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.648359Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.648391Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.649192Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.651198Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.652044Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.654700Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T17:08:53.656296Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:08:53.657268Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T17:08:53.718556Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.718637Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.719380Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.720080Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.723609Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T17:08:53.724401Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T17:08:53.785882Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.786735Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.790465Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T17:08:53.852033Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.853039Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.856273Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T17:08:53.917582Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.918498Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.922242Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T17:08:53.934618Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.935427Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.938265Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:08:53.999415Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:53.999503Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.000269Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.000667Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.004182Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T17:08:54.005290Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T17:08:54.034919Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.035755Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.038847Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T17:08:54.100207Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.101168Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.104870Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T17:08:54.165586Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.166374Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.170785Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:08:54.231455Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.232528Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.235874Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T17:08:54.240445Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.241120Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.244289Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T17:08:54.273047Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.273838Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.276408Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T17:08:54.305783Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.305856Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.306546Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.308468Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.311305Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T17:08:54.312173Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T17:08:54.373830Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.373930Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.373959Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.374696Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.377036Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.379618Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T17:08:54.380048Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.380687Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T17:08:54.383375Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:08:54.444637Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.444726Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.444759Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.445483Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.446136Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.446555Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.449654Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:08:54.450933Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T17:08:54.451846Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:08:54.511436Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.511510Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.511536Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.512490Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.512837Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.513088Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.518357Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T17:08:54.518611Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T17:08:54.579412Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.580194Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.583042Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T17:08:54.596203Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.596923Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.599776Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T17:08:54.628916Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.629627Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.633083Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:08:54.633283Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.633864Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.636778Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T17:08:54.698264Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.698365Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.699067Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.699377Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.702845Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:08:54.704281Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:08:54.763967Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.764082Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.765192Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.765981Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.770561Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T17:08:54.771384Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T17:08:54.801193Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.801888Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.804710Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T17:08:54.834311Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.834985Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.838163Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T17:08:54.839077Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.839705Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.843509Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T17:08:54.872283Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.873022Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.875641Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:08:54.937056Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.937784Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:54.940827Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T17:08:55.002471Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.003182Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.005927Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T17:08:55.035298Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.035980Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.038601Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.038852Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T17:08:55.039709Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.042571Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T17:08:55.104249Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.104919Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.108443Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:08:55.219701Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.220406Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.223260Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T17:08:55.284845Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.285448Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.288230Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T17:08:55.450201Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.450918Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.454179Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T17:08:55.483352Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.484014Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.486957Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:08:55.516282Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.516896Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.520025Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T17:08:55.532972Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.533529Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.536062Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:08:55.565750Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.566361Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.569082Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T17:08:55.598723Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.599320Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.602156Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:08:55.663423Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.664071Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.666733Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T17:08:55.728363Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.728944Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.732096Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T17:08:55.793346Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.793955Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.796533Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T17:08:55.859491Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.973803Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.974392Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:55.977326Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:08:56.038707Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.153037Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.153606Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.156958Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T17:08:56.217899Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.282364Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.282880Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.285742Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T17:08:56.297927Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T17:08:56.299155Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.299232Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.299662Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.299938Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.303048Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T17:08:56.303560Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T17:08:56.333223Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.336958Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.338500Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.804230Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.804312Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.804749Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.806607Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.809085Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T17:08:56.810436Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T17:08:56.871924Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.871998Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.872233Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.872457Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.873156Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.873944Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.877855Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:08:56.879351Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:08:56.880852Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:08:56.940605Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.940690Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.940717Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.940946Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.941213Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.944261Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:08:56.972115Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:08:56.973491Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.973562Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.973749Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:08:56.975734Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:08:57.037918Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:01.311438Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:09:09.561677Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:09:09.561677Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] 
[2026-06-04T17:09:09.561677Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:09:09.561781Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] 
[2026-06-04T17:09:09.561789Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:09:09.561796Z] [nf-2fc22ebf5fe5dd79b7f3f10e1a07acf8-11a54-2kdfw] [613_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec