File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/389ee584f55842324645a80f4b4bea/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h71jc_ma because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:45,850 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:46,629 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:46,787 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:47,658 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:47,805 - cnv_pipe.batch.run_model - INFO - Processing cluster 1227 with 196 probes
2026-06-04 17:14:48,169 - cnv_pipe.batch.run_model.cluster1227 - INFO - Child process started for cluster 1227 with 196 probes
2026-06-04 17:15:43,885 - cnv_pipe.batch.run_model.cluster1227 - INFO - Child process finished cluster 1227. Wrote cluster_1227_samples.csv and cluster_1227_params.csv
2026-06-04 17:15:43,886 - cnv_pipe.batch.run_model - INFO - Cluster 1227 finished in 56.08 seconds. Status: SUCCESS