mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lmq9lv4_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:00,575 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:01,662 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:01,870 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:03,138 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:03,369 - cnv_pipe.batch.run_model - INFO - Processing cluster 699 with 187 probes
2026-06-04 17:13:03,866 - cnv_pipe.batch.run_model.cluster699 - INFO - Child process started for cluster 699 with 187 probes
2026-06-04 17:14:18,627 - cnv_pipe.batch.run_model.cluster699 - INFO - Child process finished cluster 699. Wrote cluster_699_samples.csv and cluster_699_params.csv
2026-06-04 17:14:18,628 - cnv_pipe.batch.run_model - INFO - Cluster 699 finished in 75.26 seconds. Status: SUCCESS