File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/9bf911234f3435651f46e2ffc73940/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wf8mtx60 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:27,684 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:28,556 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:28,727 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:29,718 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:29,896 - cnv_pipe.batch.run_model - INFO - Processing cluster 843 with 182 probes
2026-06-04 17:13:30,279 - cnv_pipe.batch.run_model.cluster843 - INFO - Child process started for cluster 843 with 182 probes
2026-06-04 17:14:24,148 - cnv_pipe.batch.run_model.cluster843 - INFO - Child process finished cluster 843. Wrote cluster_843_samples.csv and cluster_843_params.csv
2026-06-04 17:14:24,149 - cnv_pipe.batch.run_model - INFO - Cluster 843 finished in 54.25 seconds. Status: SUCCESS