cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/foresight_clarity_targets_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_foresight_clarity_targets_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:153000001, elapsed 0.0s, est remaining 0.5s, peak mem 100MB, user 0.0s, sys 0.3s, output queue size 17
progress 10% @chr2:93000001, elapsed 0.1s, est remaining 0.5s, peak mem 100MB, user 0.1s, sys 1.1s, output queue size 15
progress 15% @chr2:229000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.1s, sys 1.7s, output queue size 9
progress 20% @chr3:149000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.2s, sys 2.5s, output queue size 16
progress 25% @chr4:110000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.3s, sys 3.0s, output queue size 29
progress 30% @chr5:42000001, elapsed 0.2s, est remaining 0.4s, peak mem 100MB, user 0.3s, sys 3.8s, output queue size 44
progress 35% @chr6:57000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 4.5s, output queue size 8
progress 40% @chr7:72000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.5s, sys 5.1s, output queue size 9
progress 45% @chr8:71000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.6s, sys 5.8s, output queue size 11
progress 50% @chr9:68000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.7s, sys 6.4s, output queue size 17
progress 55% @chr10:91000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.7s, sys 7.2s, output queue size 32
progress 60% @chr11:115000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.8s, sys 7.8s, output queue size 42
progress 65% @chr13:34000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.9s, sys 8.6s, output queue size 6
progress 70% @chr14:55000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 0.9s, sys 9.2s, output queue size 16
progress 75% @chr16:20000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 1.0s, sys 9.9s, output queue size 5
progress 80% @chr18:22000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 1.1s, sys 10.5s, output queue size 12
progress 85% @chr20:12000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 1.2s, sys 11.1s, output queue size 10
progress 90% @chr21:13000001, elapsed 0.5s, est remaining 0.1s, peak mem 127MB, user 1.6s, sys 11.6s, output queue size 114
progress 95% @chrY:48000001, elapsed 0.5s, est remaining 0.0s, peak mem 141MB, user 1.9s, sys 12.3s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 165MB, user 3.1s, sys 13.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395352
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.244 user 6.887 sys 8.416 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.001 sys 0.804 real
idle: 75 calls 0.004 user 0.012 sys 38.538 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 173301760 mem 3.301 user 13.754 sys 1.946 real