File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/9b73c4b5f1c61479c2056890cf59ae/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jloxf0fh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:37,076 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:37,953 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:38,133 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:39,132 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:39,290 - cnv_pipe.batch.run_model - INFO - Processing cluster 891 with 151 probes
2026-06-04 17:13:39,675 - cnv_pipe.batch.run_model.cluster891 - INFO - Child process started for cluster 891 with 151 probes
2026-06-04 17:14:27,015 - cnv_pipe.batch.run_model.cluster891 - INFO - Child process finished cluster 891. Wrote cluster_891_samples.csv and cluster_891_params.csv
2026-06-04 17:14:27,016 - cnv_pipe.batch.run_model - INFO - Cluster 891 finished in 47.73 seconds. Status: SUCCESS