File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/54b68f3934a6193c0add0c1d93e3e0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ajpc59df because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:51,144 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:51,926 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:52,092 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:52,983 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:53,140 - cnv_pipe.batch.run_model - INFO - Processing cluster 1257 with 159 probes
2026-06-04 17:14:53,516 - cnv_pipe.batch.run_model.cluster1257 - INFO - Child process started for cluster 1257 with 159 probes
2026-06-04 17:15:41,274 - cnv_pipe.batch.run_model.cluster1257 - INFO - Child process finished cluster 1257. Wrote cluster_1257_samples.csv and cluster_1257_params.csv
2026-06-04 17:15:41,275 - cnv_pipe.batch.run_model - INFO - Cluster 1257 finished in 48.13 seconds. Status: SUCCESS