File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/09a2be326b4c81987003bd1dc7b46f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6zkc4dws because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:18,823 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:19,697 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:19,873 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:20,962 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:21,033 - cnv_pipe.batch.run_model - INFO - Processing cluster 1077 with 134 probes
2026-06-04 17:14:21,406 - cnv_pipe.batch.run_model.cluster1077 - INFO - Child process started for cluster 1077 with 134 probes
2026-06-04 17:15:01,282 - cnv_pipe.batch.run_model.cluster1077 - INFO - Child process finished cluster 1077. Wrote cluster_1077_samples.csv and cluster_1077_params.csv
2026-06-04 17:15:01,283 - cnv_pipe.batch.run_model - INFO - Cluster 1077 finished in 40.25 seconds. Status: SUCCESS