File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/c61fb339ef9c45fdb4a33398314a23/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qic8bmfi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:12:17,812 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:12:18,653 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:12:18,833 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:12:19,921 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:12:19,992 - cnv_pipe.batch.run_model - INFO - Processing cluster 492 with 192 probes
2026-06-04 17:12:20,374 - cnv_pipe.batch.run_model.cluster492 - INFO - Child process started for cluster 492 with 192 probes
2026-06-04 17:13:17,042 - cnv_pipe.batch.run_model.cluster492 - INFO - Child process finished cluster 492. Wrote cluster_492_samples.csv and cluster_492_params.csv
2026-06-04 17:13:17,043 - cnv_pipe.batch.run_model - INFO - Cluster 492 finished in 57.05 seconds. Status: SUCCESS