File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/14fa1e4c10e1443595f11645de2d51/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n7pr5_s2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:42,086 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:42,938 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:43,110 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:44,082 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:44,166 - cnv_pipe.batch.run_model - INFO - Processing cluster 1204 with 183 probes
2026-06-04 17:14:44,656 - cnv_pipe.batch.run_model.cluster1204 - INFO - Child process started for cluster 1204 with 183 probes
2026-06-04 17:15:38,917 - cnv_pipe.batch.run_model.cluster1204 - INFO - Child process finished cluster 1204. Wrote cluster_1204_samples.csv and cluster_1204_params.csv
2026-06-04 17:15:38,919 - cnv_pipe.batch.run_model - INFO - Cluster 1204 finished in 54.75 seconds. Status: SUCCESS