File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/eca20d14b9aa1d1842ccaf9df06a1a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dnqsozky because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:14,595 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:15,381 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:15,550 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:16,476 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:16,657 - cnv_pipe.batch.run_model - INFO - Processing cluster 1058 with 138 probes
2026-06-04 17:14:17,041 - cnv_pipe.batch.run_model.cluster1058 - INFO - Child process started for cluster 1058 with 138 probes
2026-06-04 17:14:58,647 - cnv_pipe.batch.run_model.cluster1058 - INFO - Child process finished cluster 1058. Wrote cluster_1058_samples.csv and cluster_1058_params.csv
2026-06-04 17:14:58,648 - cnv_pipe.batch.run_model - INFO - Cluster 1058 finished in 41.99 seconds. Status: SUCCESS