File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/4e613a472a965377a6c31b444d7929/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mor20pn7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:12:57,525 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:12:58,344 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:12:58,507 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:12:59,441 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:12:59,606 - cnv_pipe.batch.run_model - INFO - Processing cluster 693 with 200 probes
2026-06-04 17:12:59,981 - cnv_pipe.batch.run_model.cluster693 - INFO - Child process started for cluster 693 with 200 probes
2026-06-04 17:13:58,854 - cnv_pipe.batch.run_model.cluster693 - INFO - Child process finished cluster 693. Wrote cluster_693_samples.csv and cluster_693_params.csv
2026-06-04 17:13:58,855 - cnv_pipe.batch.run_model - INFO - Cluster 693 finished in 59.25 seconds. Status: SUCCESS