File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/18d4f472eb8b42318599c39e8a76ac/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d6330jyr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:58,503 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:59,371 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:59,547 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:00,682 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:00,755 - cnv_pipe.batch.run_model - INFO - Processing cluster 992 with 187 probes
2026-06-04 17:14:01,138 - cnv_pipe.batch.run_model.cluster992 - INFO - Child process started for cluster 992 with 187 probes
2026-06-04 17:14:58,609 - cnv_pipe.batch.run_model.cluster992 - INFO - Child process finished cluster 992. Wrote cluster_992_samples.csv and cluster_992_params.csv
2026-06-04 17:14:58,610 - cnv_pipe.batch.run_model - INFO - Cluster 992 finished in 57.86 seconds. Status: SUCCESS