File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/2584d06906b1106178a7ed77fe2922/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6tqht3mw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:14:45,641 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:14:46,488 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:14:46,656 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:14:47,591 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:14:47,744 - cnv_pipe.batch.run_model - INFO - Processing cluster 1219 with 196 probes
2026-06-04 17:14:48,115 - cnv_pipe.batch.run_model.cluster1219 - INFO - Child process started for cluster 1219 with 196 probes
2026-06-04 17:15:44,862 - cnv_pipe.batch.run_model.cluster1219 - INFO - Child process finished cluster 1219. Wrote cluster_1219_samples.csv and cluster_1219_params.csv
2026-06-04 17:15:44,863 - cnv_pipe.batch.run_model - INFO - Cluster 1219 finished in 57.12 seconds. Status: SUCCESS