[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXZyosNq/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXZyosNq/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXZyosNq/chr6_138229684-138229952.bed.gz.tbi
[2026-06-04T17:09:05.387520Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:09:05.388958Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:09:05.388971Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:09:05.388975Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:09:05.388980Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXZyosNq'
[2026-06-04T17:09:05.388984Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:09:05.388989Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:09:05.388993Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:09:05.388997Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T17:09:05.389001Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:09:05.389005Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:09:05.389008Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:09:05.389012Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:09:05.389015Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:09:05.389697Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:09:05.389824Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:09:05.395955Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:09:05.396812Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:09:05.396980Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:09:05.397209Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:09:05.397490Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.398025Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.398145Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.398224Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.398347Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.398416Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.398788Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.399087Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.399256Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.399566Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.399653Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.400541Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.400719Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.402728Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.403036Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:09:05.403398Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.403543Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.403611Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.403723Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.403785Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.403973Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.404043Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.404159Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.404226Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.404345Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.404616Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.404988Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405057Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405169Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405237Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405353Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405471Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405603Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405669Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405851Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.405921Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.406298Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.406628Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.406750Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.406813Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.406928Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.406993Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407103Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407171Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407281Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407344Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407461Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407525Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.407692Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.408146Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.408780Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.408849Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.408956Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409017Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409123Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409185Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409293Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409356Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409460Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409521Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409633Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.409692Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.410172Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.410646Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.410758Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.410826Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.410932Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.410992Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.411103Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.411167Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.411275Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.411338Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.411443Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.411505Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.412790Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.413049Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.413710Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.413792Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.413904Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.413970Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414094Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414159Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414276Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414338Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414451Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414519Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.414787Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415450Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415566Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415633Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415747Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415813Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415922Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.415987Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.416098Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.416161Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.416277Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.416337Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.416474Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.416659Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.417651Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.417727Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.417846Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.417914Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.418024Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.418107Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.418219Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.418285Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.418501Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.419244Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.421245Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.422239Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.422736Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.423683Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.436918Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.437638Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.437724Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.437912Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.439126Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.439313Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.439476Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.439593Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.439868Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.440085Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.440729Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.441620Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.441758Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.442357Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:09:05.443299Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:09:05.443569Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.444832Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.447617Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.448218Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:09:05.448730Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.452141Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:09:05.458513Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:09:05.459779Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:09:05.464151Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:09:05.465353Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:09:05.467674Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:09:05.470069Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:09:05.583842Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.583911Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.583936Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.584866Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.585206Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.585679Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.590658Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:09:05.592741Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:09:05.593624Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:09:05.701063Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.702347Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:05.705882Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:09:06.168056Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.169319Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.172275Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:09:06.233719Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.233802Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.234892Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.235203Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.238929Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:09:06.239678Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:09:06.550991Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.551087Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.552151Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.552800Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.556274Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:09:06.557553Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:09:06.617754Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.617839Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.618905Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.619393Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.622659Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:09:06.623806Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:09:06.683871Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.683957Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.684954Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.685628Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.688905Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:09:06.690238Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:09:06.702112Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.703134Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.706204Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:09:06.767586Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.768632Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.772246Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:09:06.776693Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.777686Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.781540Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:09:06.841926Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.843051Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:06.846419Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:09:07.108380Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.109535Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.113225Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:09:07.174048Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.174154Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.175218Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.175576Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.179718Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:09:07.541985Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.543121Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.547026Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:07.658598Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.659741Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.663261Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:07.774417Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.775528Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.779085Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:07.807675Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.809260Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.809804Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.812404Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.813113Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:09:07.816155Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:09:07.844811Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.844889Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.845823Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.846124Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.850035Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:09:07.850479Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:09:07.960354Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.961397Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:07.964656Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:09:08.025682Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.025769Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.026724Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.027047Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.030198Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:09:08.031350Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:09:08.091588Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.092532Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.096522Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:09:08.157030Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.157994Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.161749Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:09:08.222167Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.223046Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.226082Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:09:08.287458Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.287541Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.288434Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.288938Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.292025Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:09:08.325131Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:09:08.353403Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.353482Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.354329Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.354869Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.358278Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:09:08.359518Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:09:08.419375Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.419456Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.419480Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.420306Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.420713Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.421266Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.424015Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:09:08.426868Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:09:08.427561Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:09:08.455794Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.456624Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.460295Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:09:08.460584Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.461440Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.464928Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:09:08.465184Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.465937Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.468924Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:09:08.498355Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.498424Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.499189Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.499643Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.502818Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:09:08.504033Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:09:08.563894Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.563968Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.564793Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.565124Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.568276Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:09:08.569141Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:09:08.629526Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.629625Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.630743Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.631157Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.635331Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:09:08.636518Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:09:08.846418Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.847306Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.850104Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:09:08.911373Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.911451Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.912254Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.912549Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.916007Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:09:08.916990Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:09:08.977147Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.977224Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.978013Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.978389Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:09:08.981464Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:09:09.021527Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:09:09.042906Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.043864Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.047244Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:09:09.108435Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.109322Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.112516Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:09:09.173882Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.174738Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.178080Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:09:09.239424Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.239520Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.240310Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.240739Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.244275Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:09:09.245042Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:09:09.273226Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.274012Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.276904Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:09:09.589031Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.590006Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.593605Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:09:09.622372Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.623299Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.626436Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:09:09.687395Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.688268Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.691385Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:09:09.752714Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.753707Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.757051Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:09:09.785896Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.786716Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.789698Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:09:09.790281Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.790921Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.794217Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:09:09.822959Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.823809Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.826940Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:09:09.828039Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.828777Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.832553Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:09:09.860943Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.862162Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.862430Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.863969Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.866650Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:09:09.867522Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:09:09.928306Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.929403Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:09.932316Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:09:10.093884Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.094729Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.097911Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:09:10.159544Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.160405Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.163677Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:09:10.465796Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:09:10.476222Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.476320Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.477008Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.477346Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.481401Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:09:10.482072Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:09:10.542527Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.543409Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.546876Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:09:10.658361Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.659225Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.662390Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:09:10.874215Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.875049Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.878164Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:09:10.939711Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.940504Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:09:10.943673Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:09:11.004948Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.005716Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.009561Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:09:11.070357Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.071124Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.074751Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:09:11.135496Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.136164Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.139729Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:09:11.140582Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.141196Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.144166Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:09:11.149034Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.149619Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.152495Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:09:11.181700Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.181774Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.182374Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.183035Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.183555Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.187465Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:09:11.188326Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:09:11.188580Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.191519Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:09:11.220558Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.221156Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.224391Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:09:11.229019Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.229593Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.232949Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:09:11.261657Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.262309Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.265395Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:09:11.266211Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.266987Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.269633Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:09:11.298889Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.299468Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.301484Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.302177Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.302657Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:09:11.305365Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:09:11.334457Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.335027Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.337980Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:09:11.399568Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.400215Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.403045Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:09:11.464264Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.464346Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.464908Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.466657Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.468999Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:09:11.470208Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:09:11.499594Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.499652Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.500166Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.503133Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:09:11.564554Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.565137Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:09:11.568027Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:09:11.597422Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.062782Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.063549Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.066866Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:09:12.079840Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.080396Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.083279Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:09:12.096259Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.096922Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.098786Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.099710Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:09:12.114805Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.130745Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.245019Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.245506Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.248292Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:09:12.277488Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.277979Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.280332Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:09:12.281540Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.313513Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.528033Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.528533Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.531400Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:09:12.560557Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.560856Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.560978Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.561358Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.561916Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.566228Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:09:12.567606Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:09:12.568611Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:09:12.595254Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.595417Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.595443Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.595633Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.595965Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.599492Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:09:12.600171Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:09:12.628399Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.631734Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.631895Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:09:12.634417Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:09:12.663796Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:09:16.036094Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:09:24.277519Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:09:24.277519Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] 
[2026-06-04T17:09:24.277519Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:09:24.277611Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] 
[2026-06-04T17:09:24.277617Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:09:24.277624Z] [nf-a1e186bf8c3c958ca7b256276055da41-3cc3a-vngcw] [594_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec