File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/0ae59c0a1922f5cfc26b6f8a566c3b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oae9usxb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:16,392 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:17,253 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:17,423 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:18,486 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:18,559 - cnv_pipe.batch.run_model - INFO - Processing cluster 792 with 173 probes
2026-06-04 17:13:18,943 - cnv_pipe.batch.run_model.cluster792 - INFO - Child process started for cluster 792 with 173 probes
2026-06-04 17:14:10,043 - cnv_pipe.batch.run_model.cluster792 - INFO - Child process finished cluster 792. Wrote cluster_792_samples.csv and cluster_792_params.csv
2026-06-04 17:14:10,044 - cnv_pipe.batch.run_model - INFO - Cluster 792 finished in 51.49 seconds. Status: SUCCESS