File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/5c3790c33568aae83acde4999e2f73/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qau9bz9e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:31,935 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:32,729 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:32,899 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:33,971 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:34,044 - cnv_pipe.batch.run_model - INFO - Processing cluster 868 with 162 probes
2026-06-04 17:13:34,425 - cnv_pipe.batch.run_model.cluster868 - INFO - Child process started for cluster 868 with 162 probes
2026-06-04 17:14:22,415 - cnv_pipe.batch.run_model.cluster868 - INFO - Child process finished cluster 868. Wrote cluster_868_samples.csv and cluster_868_params.csv
2026-06-04 17:14:22,416 - cnv_pipe.batch.run_model - INFO - Cluster 868 finished in 48.37 seconds. Status: SUCCESS