File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/69b4cdb9883ce4c2bdf7a50bbda460/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x903_cv4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:13:08,876 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:13:09,697 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:13:09,873 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:13:10,959 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:13:11,030 - cnv_pipe.batch.run_model - INFO - Processing cluster 757 with 173 probes
2026-06-04 17:13:11,413 - cnv_pipe.batch.run_model.cluster757 - INFO - Child process started for cluster 757 with 173 probes
2026-06-04 17:14:02,496 - cnv_pipe.batch.run_model.cluster757 - INFO - Child process finished cluster 757. Wrote cluster_757_samples.csv and cluster_757_params.csv
2026-06-04 17:14:02,497 - cnv_pipe.batch.run_model - INFO - Cluster 757 finished in 51.47 seconds. Status: SUCCESS