mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gnla76be because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:10:58,326 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:10:59,181 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:10:59,357 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:11:00,369 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:11:00,547 - cnv_pipe.batch.run_model - INFO - Processing cluster 73 with 135 probes
2026-06-04 17:11:00,922 - cnv_pipe.batch.run_model.cluster73 - INFO - Child process started for cluster 73 with 135 probes
2026-06-04 17:11:46,203 - cnv_pipe.batch.run_model.cluster73 - INFO - Child process finished cluster 73. Wrote cluster_73_samples.csv and cluster_73_params.csv
2026-06-04 17:11:46,204 - cnv_pipe.batch.run_model - INFO - Cluster 73 finished in 45.66 seconds. Status: SUCCESS