File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/63c94ee10ab1f76e9d3c6ec8db9ba1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cikrkdxu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:10,889 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:11,719 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:11,888 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:12,786 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:12,951 - cnv_pipe.batch.run_model - INFO - Processing cluster 791 with 200 probes
2026-06-04 17:23:13,318 - cnv_pipe.batch.run_model.cluster791 - INFO - Child process started for cluster 791 with 200 probes
2026-06-04 17:24:12,748 - cnv_pipe.batch.run_model.cluster791 - INFO - Child process finished cluster 791. Wrote cluster_791_samples.csv and cluster_791_params.csv
2026-06-04 17:24:12,752 - cnv_pipe.batch.run_model - INFO - Cluster 791 finished in 59.80 seconds. Status: SUCCESS