File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/7700bb31fb38836f0eba2729080032/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fau61db4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:30,560 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:31,477 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:31,662 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:32,741 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:32,930 - cnv_pipe.batch.run_model - INFO - Processing cluster 824 with 179 probes
2026-06-04 17:23:33,352 - cnv_pipe.batch.run_model.cluster824 - INFO - Child process started for cluster 824 with 179 probes
2026-06-04 17:24:27,783 - cnv_pipe.batch.run_model.cluster824 - INFO - Child process finished cluster 824. Wrote cluster_824_samples.csv and cluster_824_params.csv
2026-06-04 17:24:27,784 - cnv_pipe.batch.run_model - INFO - Cluster 824 finished in 54.85 seconds. Status: SUCCESS