cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/FINAL_hotspot_list_07302025_hg38_sorted.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_FINAL_hotspot_list_07302025_hg38_sorted.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 0.0s, est remaining 0.5s, peak mem 100MB, user 0.1s, sys 0.3s, output queue size 7
progress 10% @chr2:94000001, elapsed 0.0s, est remaining 0.4s, peak mem 100MB, user 0.1s, sys 1.1s, output queue size 8
progress 15% @chr2:227000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.2s, sys 1.6s, output queue size 11
progress 20% @chr3:146000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.2s, sys 2.4s, output queue size 28
progress 25% @chr4:106000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.3s, sys 3.0s, output queue size 27
progress 30% @chr5:107000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.3s, sys 3.6s, output queue size 20
progress 35% @chr6:57000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.3s, sys 4.2s, output queue size 15
progress 40% @chr7:48000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 4.7s, output queue size 8
progress 45% @chr8:48000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.5s, sys 5.4s, output queue size 9
progress 50% @chr9:63000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.5s, sys 6.1s, output queue size 12
progress 55% @chr10:116000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.5s, sys 6.7s, output queue size 10
progress 60% @chr11:115000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.6s, sys 7.2s, output queue size 8
progress 65% @chr13:7000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.7s, sys 7.9s, output queue size 8
progress 70% @chr14:51000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 0.8s, sys 8.5s, output queue size 10
progress 75% @chr16:21000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 0.8s, sys 9.1s, output queue size 10
progress 80% @chr18:22000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 0.8s, sys 9.7s, output queue size 8
progress 85% @chr20:43000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 0.9s, sys 10.3s, output queue size 8
progress 90% @chrX:36000001, elapsed 0.4s, est remaining 0.0s, peak mem 127MB, user 1.3s, sys 10.8s, output queue size 114
progress 95% @chrY:46000001, elapsed 0.5s, est remaining 0.0s, peak mem 141MB, user 1.6s, sys 11.3s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.7s, est remaining 0.0s, peak mem 162MB, user 2.7s, sys 11.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395360
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.098 user 6.048 sys 7.638 real
done: 1 calls 0.000 user 0.000 sys 0.002 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.003 sys 0.754 real
idle: 74 calls 0.008 user 0.018 sys 38.484 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 170098688 mem 2.931 user 12.660 sys 1.893 real