File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/e6e157e21ac1258a75fe072edcc593/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-laps9ix_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:22:47,796 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:22:48,596 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:22:48,765 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:22:49,643 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:22:49,710 - cnv_pipe.batch.run_model - INFO - Processing cluster 665 with 200 probes
2026-06-04 17:22:50,158 - cnv_pipe.batch.run_model.cluster665 - INFO - Child process started for cluster 665 with 200 probes
2026-06-04 17:23:45,611 - cnv_pipe.batch.run_model.cluster665 - INFO - Child process finished cluster 665. Wrote cluster_665_samples.csv and cluster_665_params.csv
2026-06-04 17:23:45,612 - cnv_pipe.batch.run_model - INFO - Cluster 665 finished in 55.90 seconds. Status: SUCCESS