cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:152000001, elapsed 0.0s, est remaining 0.5s, peak mem 114MB, user 0.0s, sys 0.4s, output queue size 9
progress 10% @chr2:83000001, elapsed 0.0s, est remaining 0.4s, peak mem 114MB, user 0.1s, sys 0.9s, output queue size 37
progress 15% @chr3:8000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.2s, sys 1.4s, output queue size 8
progress 20% @chr3:144000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.2s, sys 2.1s, output queue size 35
progress 25% @chr4:108000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.4s, sys 2.7s, output queue size 7
progress 30% @chr5:75000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 3.2s, output queue size 11
progress 35% @chr6:59000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 3.7s, output queue size 18
progress 40% @chr7:66000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.7s, sys 4.2s, output queue size 7
progress 45% @chr8:50000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.9s, sys 4.6s, output queue size 27
progress 50% @chr9:66000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 1.0s, sys 5.1s, output queue size 7
progress 55% @chr10:85000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 1.1s, sys 5.7s, output queue size 10
progress 60% @chr12:2000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 1.2s, sys 6.2s, output queue size 26
progress 65% @chr13:8000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 1.3s, sys 6.8s, output queue size 7
progress 70% @chr14:52000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.4s, sys 7.3s, output queue size 10
progress 75% @chr16:7000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.5s, sys 7.9s, output queue size 25
progress 80% @chr18:15000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.8s, sys 8.2s, output queue size 7
progress 85% @chr20:17000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.9s, sys 8.7s, output queue size 25
progress 90% @chrX:39000001, elapsed 0.4s, est remaining 0.0s, peak mem 142MB, user 2.2s, sys 9.2s, output queue size 114
progress 95% @chrY:34000001, elapsed 0.4s, est remaining 0.0s, peak mem 160MB, user 2.6s, sys 9.7s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 178MB, user 4.1s, sys 10.4s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395360
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.169 user 5.665 sys 6.736 real
done: 1 calls 0.004 user 0.000 sys 0.008 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 0.764 real
idle: 74 calls 0.012 user 0.021 sys 38.956 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 187420672 mem 4.550 user 11.123 sys 2.273 real