File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/65b4060a248fb023dade3c8d171d75/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r5m94eqh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:24:00,198 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:24:00,989 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:24:01,152 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:24:02,076 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:24:02,151 - cnv_pipe.batch.run_model - INFO - Processing cluster 1045 with 199 probes
2026-06-04 17:24:02,604 - cnv_pipe.batch.run_model.cluster1045 - INFO - Child process started for cluster 1045 with 199 probes
2026-06-04 17:24:57,883 - cnv_pipe.batch.run_model.cluster1045 - INFO - Child process finished cluster 1045. Wrote cluster_1045_samples.csv and cluster_1045_params.csv
2026-06-04 17:24:57,884 - cnv_pipe.batch.run_model - INFO - Cluster 1045 finished in 55.73 seconds. Status: SUCCESS