cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 0.0s, est remaining 0.5s, peak mem 114MB, user 0.1s, sys 0.3s, output queue size 9
progress 10% @chr2:67000001, elapsed 0.1s, est remaining 0.5s, peak mem 114MB, user 0.2s, sys 1.0s, output queue size 28
progress 15% @chr2:225000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.2s, sys 1.6s, output queue size 13
progress 20% @chr3:146000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.3s, sys 2.2s, output queue size 11
progress 25% @chr4:107000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.4s, sys 2.9s, output queue size 9
progress 30% @chr5:80000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 3.5s, output queue size 38
progress 35% @chr6:60000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.6s, sys 4.0s, output queue size 45
progress 40% @chr7:46000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.6s, sys 4.8s, output queue size 12
progress 45% @chr8:52000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.7s, sys 5.4s, output queue size 9
progress 50% @chr9:95000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.7s, sys 6.1s, output queue size 7
progress 55% @chr10:114000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.8s, sys 6.8s, output queue size 8
progress 60% @chr12:4000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.8s, sys 7.4s, output queue size 15
progress 65% @chr13:38000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.9s, sys 8.0s, output queue size 8
progress 70% @chr14:47000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 8.7s, output queue size 14
progress 75% @chr16:6000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.1s, sys 9.2s, output queue size 7
progress 80% @chr18:16000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.2s, sys 9.9s, output queue size 8
progress 85% @chr20:9000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.2s, sys 10.6s, output queue size 13
progress 90% @chrX:37000001, elapsed 0.5s, est remaining 0.1s, peak mem 144MB, user 1.6s, sys 11.0s, output queue size 114
progress 95% @chrY:35000001, elapsed 0.5s, est remaining 0.0s, peak mem 159MB, user 1.9s, sys 11.6s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 181MB, user 3.5s, sys 12.2s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813902
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.128 user 6.271 sys 7.863 real
done: 1 calls 0.002 user 0.000 sys 0.007 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.001 sys 0.795 real
idle: 74 calls 0.009 user 0.019 sys 38.688 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 190603264 mem 4.057 user 12.993 sys 2.304 real