Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/e97a368289e5bc32c95de44af7210b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/e97a368289e5bc32c95de44af7210b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/e85286c281ec5e1c9dcd4b1b10d254/positive_somatic_control_2.snv_indel.phased.vep.vcf.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 184 variants, labeled 0 as HOTSPOT