File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/0dc894b96cb70c74a9caecea9245a6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0358o84j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:25,524 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:26,299 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:26,461 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:27,286 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:27,422 - cnv_pipe.batch.run_model - INFO - Processing cluster 871 with 192 probes
2026-06-04 17:23:27,786 - cnv_pipe.batch.run_model.cluster871 - INFO - Child process started for cluster 871 with 192 probes
2026-06-04 17:24:21,962 - cnv_pipe.batch.run_model.cluster871 - INFO - Child process finished cluster 871. Wrote cluster_871_samples.csv and cluster_871_params.csv
2026-06-04 17:24:21,963 - cnv_pipe.batch.run_model - INFO - Cluster 871 finished in 54.54 seconds. Status: SUCCESS